STRINGSTRING
XP_500633.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500633.1" - YALI0B08250p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500633.1YALI0B08250p (728 aa)    
Predicted Functional Partners:
XP_504906.1
YALI0F02453p (432 aa)
     
  0.994
PAB1
YALI0C00539p; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation t [...] (629 aa)
     
  0.978
XP_500351.1
YALI0B00616p (589 aa)
     
  0.966
XP_502225.1
Elongation factor 1 gamma domain-containing protein (401 aa)
     
  0.933
XP_500806.1
Elongation factor 1 gamma domain-containing protein (401 aa)
     
  0.933
XP_501146.1
YALI0B20658p (404 aa)
     
 
  0.920
RPS1
40S ribosomal protein S1 (255 aa)
     
  0.916
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (270 aa)
   
  0.881
XP_503209.1
YALI0D23881p (964 aa)
     
  0.881
XP_500143.1
YALI0A16797p (632 aa)
       
      0.878
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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