STRINGSTRING
XP_500778.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500778.1" - Ribosome biogenesis protein BRX1 in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500778.1Ribosome biogenesis protein BRX1 (286 aa)    
Predicted Functional Partners:
XP_503601.1
YALI0E05797p (388 aa)
     
 
  0.997
DBP9
YALI0F31493p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (544 aa)
     
 
  0.996
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
     
 
  0.996
XP_505404.1
YALI0F14245p (275 aa)
     
 
  0.996
XP_500726.1
YALI0B10560p (609 aa)
     
 
  0.994
XP_506090.1
mRNA turnover protein MRT4 (233 aa)
     
 
  0.994
XP_505532.1
YALI0F17358p (653 aa)
     
      0.993
XP_505710.1
YALI0F21483p (293 aa)
     
 
  0.991
XP_499741.1
YALI0A03905p (321 aa)
     
 
  0.990
ERB1
YALI0E26389p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (820 aa)
     
 
  0.989
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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