STRINGSTRING
XP_500818.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500818.1" - YALI0B12870p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500818.1YALI0B12870p (403 aa)    
Predicted Functional Partners:
XP_501555.1
YALI0C07436p (582 aa)
   
  0.814
XP_505243.1
YALI0F10307p (421 aa)
       
 
  0.614
FEN1
YALI0F20042p; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome [...] (389 aa)
   
 
  0.585
NTG1
YALI0F03641p; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (483 aa)
     
 
  0.569
XP_502661.1
YALI0D10571p; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
       
 
  0.563
XP_501333.1
YALI0C01573p (640 aa)
       
 
  0.544
XP_505910.1
YALI0F26499p; Component of the post-replicative DNA mismatch repair system (MMR) (1149 aa)
   
 
  0.542
XP_504806.1
YALI0F00154p; Component of the post-replicative DNA mismatch repair system (MMR) (887 aa)
   
 
  0.538
XP_502588.1
YALI0D08756p (883 aa)
     
 
  0.537
XP_504276.1
YALI0E22671p (677 aa)
   
 
  0.534
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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