STRINGSTRING
XP_500850.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500850.1" - YALI0B13706p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500850.1YALI0B13706p (522 aa)    
Predicted Functional Partners:
XP_502013.1
YALI0C19426p (883 aa)
     
  0.991
XP_501884.1
rRNA methyltransferase NOP1 (321 aa)
   
  0.985
XP_500537.1
YALI0B05632p (519 aa)
     
  0.980
XP_501687.2
YALI0C10648p (2357 aa)
     
  0.979
XP_503948.1
YALI0E14619p (143 aa)
     
  0.978
XP_505089.1
YALI0F06644p (115 aa)
     
  0.978
XP_504496.1
YALI0E28226p (452 aa)
     
  0.978
SNU13
Small nucleolar ribonucleoprotein SNU13; Common component of the spliceosome and rRNA processing machinery. In association with the spliceosomal U4/U6.U5 tri-snRNP particle, required for splicing of pre-mRNA. In association with box C/D snoRNPs, required for processing of pre-ribosomal RNA (rRNA) and site-specific 2’-O-methylation of substrate RNAs. Essential for the accumulation and stability of U4 snRNA, U6 snRNA, and box C/D snoRNAs (By similarity) (126 aa)
     
  0.977
XP_500730.2
YALI0B10692p (641 aa)
     
  0.976
XP_505676.1
YALI0F20724p (2106 aa)
       
  0.975
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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