STRINGSTRING
XP_500857.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500857.1" - YALI0B13860p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500857.1YALI0B13860p (113 aa)    
Predicted Functional Partners:
XP_501149.1
YALI0B20724p (1158 aa)
     
  0.996
XP_500135.2
YALI0A16566p (86 aa)
     
  0.992
RSE1
YALI0D02717p; Involved in pre-mRNA splicing (1143 aa)
       
  0.991
XP_502013.1
YALI0C19426p (883 aa)
     
    0.983
XP_501420.1
YALI0C03982p (137 aa)
     
  0.983
XP_501580.1
YALI0C08030p (108 aa)
     
    0.954
XP_502449.2
YALI0D05577p (585 aa)
     
  0.953
XP_503979.1
YALI0E15356p (225 aa)
       
  0.951
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
       
    0.935
XP_503283.1
YALI0D25652p (207 aa)
     
  0.773
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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