STRINGSTRING
XP_500867.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500867.1" - YALI0B14080p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500867.1YALI0B14080p (360 aa)    
Predicted Functional Partners:
XP_501555.1
YALI0C07436p (582 aa)
     
  0.840
XP_501213.1
YALI0B22242p (1039 aa)
     
 
  0.698
XP_505458.1
YALI0F15477p (329 aa)
       
 
  0.675
FEN1
YALI0F20042p; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome [...] (389 aa)
   
 
  0.630
XP_503065.1
YALI0D20240p (1115 aa)
   
 
  0.593
XP_501749.1
YALI0C12144p (386 aa)
       
 
  0.572
NTG1
YALI0F03641p; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (483 aa)
     
 
  0.539
XP_502101.1
YALI0C21648p (1338 aa)
     
 
  0.515
XP_505243.1
YALI0F10307p (421 aa)
       
 
  0.484
RAD5
YALI0F05698p; Probable helicase, member of the UBC2/RAD6 epistasis group. Functions with DNA repair protein RAD18 in error-free postreplication DNA repair. Involved in the maintenance of wild- type rates of instability of simple repetitive sequences such as poly(GT) repeats. Seems to be involved in maintaining a balance which acts in favor of error-prone non-homologous joining during DNA double-strand breaks repairs (By similarity) (1025 aa)
       
 
  0.472
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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