STRINGSTRING
XP_500908.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500908.1" - YALI0B14971p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500908.1YALI0B14971p (1329 aa)    
Predicted Functional Partners:
XP_501729.2
YALI0C11583p (620 aa)
       
 
  0.590
XP_502194.1
YALI0C23749p (383 aa)
       
      0.563
XP_500103.1
YALI0A15686p (981 aa)
       
      0.555
XP_502799.1
YALI0D13706p (417 aa)
     
 
  0.519
XP_505816.1
YALI0F24101p (418 aa)
       
      0.476
XP_502302.1
YALI0D01892p (514 aa)
       
      0.448
POB3
YALI0D25058p; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleoso [...] (544 aa)
       
      0.444
SPT16
YALI0D14652p; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleoso [...] (1003 aa)
       
      0.444
XP_502788.1
YALI0D13464p (970 aa)
       
      0.444
XP_499751.1
YALI0A04345p (353 aa)
       
      0.444
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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