STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_B16742gYALI0B16742p. (260 aa)    
Predicted Functional Partners:
YALI0_F12991g
YALI0F12991p.
   
 0.988
YALI0_B20086g
YALI0B20086p.
   
0.986
YALI0_D01804g
YALI0D01804p; Belongs to the universal ribosomal protein uS5 family.
   
 0.981
RSM25
37S ribosomal protein S25, mitochondrial.
   
 0.972
YALI0_E30371g
YALI0E30371p.
   
 0.958
YALI0_E09691g
YALI0E09691p.
   
 0.957
YALI0_C24277g
YALI0C24277p.
  
 0.948
SOD1
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.
   
 0.942
YALI0_D08448g
37S ribosomal protein S24, mitochondrial; Involved in mitochondrial genome encoded proteins translation; Belongs to the mitochondrion-specific ribosomal protein mS35 family.
   
 0.935
YALI0_B10494g
YALI0B10494p.
   
 0.932
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.