STRINGSTRING
XP_501048.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501048.1" - YALI0B18238p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501048.1YALI0B18238p (147 aa)    
Predicted Functional Partners:
XP_505089.1
YALI0F06644p (115 aa)
     
  0.991
XP_501420.1
YALI0C03982p (137 aa)
     
  0.990
PRP46
YALI0E04697p; Involved in pre-mRNA splicing and required for cell cycle progression at G2/M (441 aa)
     
  0.990
ISY1
YALI0D10901p; Involved in pre-mRNA splicing (220 aa)
     
  0.990
CWC15
YALI0F25421p; Involved in pre-mRNA splicing (215 aa)
     
  0.989
XP_500302.1
YALI0A20768p (950 aa)
     
  0.989
XP_502209.2
YALI0C24079p (1220 aa)
     
  0.989
SLT11
YALI0E33847p; Involved in pre-mRNA splicing. Facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome. Binds to RNA (By similarity) (356 aa)
     
  0.989
XP_503358.1
YALI0D27346p (491 aa)
     
  0.988
CEF1
YALI0D20086p; Involved in pre-mRNA splicing and cell cycle control (719 aa)
     
  0.988
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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