STRINGSTRING
XP_501059.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501059.1" - YALI0B18480p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501059.1YALI0B18480p (907 aa)    
Predicted Functional Partners:
XP_500886.1
YALI0B14487p (423 aa)
     
 
  0.942
XP_504016.1
YALI0E16324p (1040 aa)
     
 
  0.783
XP_505419.1
YALI0F14575p (1091 aa)
     
 
  0.771
HTZ1
YALI0F02827p; Variant histone H2A which can replace H2A in some nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. This variant is enriched at promoters, it may keep them in a repressed state until the appropriate activat [...] (140 aa)
       
 
  0.759
XP_505993.1
YALI0F28501p (531 aa)
     
 
  0.746
XP_502503.1
YALI0D06820p (913 aa)
     
 
  0.732
XP_504876.1
YALI0F01793p (904 aa)
     
 
  0.702
GSP1
YALI0F04730p; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (214 aa)
     
 
  0.610
HTA1
YALI0E26477p; Core component of nucleosome which plays a central role in DNA double strand break (DSB) repair. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (135 aa)
       
 
  0.593
XP_506062.1
YALI0F30701p (279 aa)
     
      0.587
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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