STRINGSTRING
TRM8 protein (Yarrowia lipolytica) - STRING interaction network
"TRM8" - YALI0B19558p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRM8YALI0B19558p; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (292 aa)    
Predicted Functional Partners:
TRM82
YALI0E04785p; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit (383 aa)
     
  0.977
TRM61
YALI0F22737p; Catalytic subunit of tRNA (adenine-N(1)-)- methyltransferase, which catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in initiator methionyl-tRNA (389 aa)
     
  0.836
TRM6
YALI0B10582p; Substrate-binding subunit of tRNA (adenine-N(1)-)- methyltransferase, which catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. Binds RNA (By similarity) (487 aa)
     
 
  0.753
XP_500778.1
Ribosome biogenesis protein BRX1 (286 aa)
     
        0.699
XP_504602.1
YALI0E30723p (492 aa)
     
   
  0.697
XP_505067.1
YALI0F06182p (288 aa)
     
        0.696
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
     
        0.692
XP_499741.1
YALI0A03905p (321 aa)
     
        0.685
XP_501954.1
YALI0C17897p (257 aa)
 
            0.682
NOP7
YALI0B23342p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (590 aa)
     
        0.660
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (9%) [HD]