STRINGSTRING
XP_501108.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501108.1" - YALI0B19734p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501108.1YALI0B19734p (901 aa)    
Predicted Functional Partners:
XP_503172.1
YALI0D22979p (883 aa)
     
 
  0.938
RVB1
YALI0C21868p; DNA helicase which participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. The SWR1 complex mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. The INO80 complex remodels chromatin by shifting nucleosomes and is involved in DNA repair. Also involved in pre-rRNA processing (By similarity) (453 aa)
       
 
  0.931
RVB2
YALI0E31449p; DNA helicase which participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. The SWR1 complex mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. The INO80 complex remodels chromatin by shifting nucleosomes and is involved in DNA repair. Also involved in pre-rRNA processing (By similarity) (466 aa)
       
 
  0.929
XP_505106.1
YALI0F07084p (2316 aa)
     
 
  0.912
XP_501328.1
YALI0C01397p (314 aa)
       
 
  0.886
XP_501349.1
YALI0C02057p (3809 aa)
     
 
  0.733
XP_504493.1
YALI0E28153p (1857 aa)
     
 
  0.536
RPB5
YALI0D06457p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, RPB5 is part of the lower jaw surrounding the central large cleft and tho [...] (212 aa)
     
 
  0.535
XP_505213.2
YALI0F09559p (821 aa)
     
 
  0.534
XP_505672.1
YALI0F20636p (1845 aa)
     
 
  0.532
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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