STRINGSTRING
XP_501131.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501131.1" - YALI0B20328p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501131.1YALI0B20328p (150 aa)    
Predicted Functional Partners:
XP_500397.1
YALI0B01716p (224 aa)
       
  0.709
XP_503115.1
YALI0D21530p (526 aa)
         
  0.583
GCN5
YALI0E02772p; Acetylates histone H2B to form H2BK11ac and H2BK16ac, histone H3 to form H3K14ac, with a lower preference histone H4 to form H4K8ac and H4K16ac, and contributes to H2A.Z acetylation. Acetylation of histones gives a specific tag for epigenetic transcription activation (By similarity) (464 aa)
       
 
  0.541
XP_505322.1
YALI0F12221p (808 aa)
       
      0.513
XP_504627.1
YALI0E31262p (424 aa)
     
 
  0.493
XP_500305.1
YALI0A20834p (715 aa)
     
 
  0.493
XP_501072.1
YALI0B18759p (2052 aa)
     
 
  0.484
XP_502088.1
YALI0C21362p (374 aa)
       
 
  0.463
XP_501249.1
YALI0B23056p (227 aa)
       
 
  0.451
HHT1
YALI0F25905p; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity) (139 aa)
       
 
  0.446
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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