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RBD2 protein (Yarrowia lipolytica) - STRING interaction network
"RBD2" - YALI0B20878p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBD2YALI0B20878p; Probable serine protease (297 aa)    
Predicted Functional Partners:
XP_503996.1
YALI0E15796p (128 aa)
       
      0.580
ATG27
YALI0C15851p; Effector of VPS34 phosphatidylinositol 3-phosphate kinase signaling. Regulates the cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a role in ATG protein retrieval from the pre-autophagosomal structure (PAS) and is especially required for autophagy-dependent cycling of ATG9 (By similarity) (276 aa)
       
      0.580
XP_002143034.1
YALI0C15345p (250 aa)
       
      0.580
XP_501263.1
YALI0B23364p (356 aa)
           
  0.444
XP_503854.1
YALI0E12221p (641 aa)
       
      0.434
XP_500805.1
YALI0B12540p (388 aa)
       
      0.422
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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