STRINGSTRING
XP_501213.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501213.1" - YALI0B22242p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501213.1YALI0B22242p (1039 aa)    
Predicted Functional Partners:
XP_503288.1
YALI0D25762p (370 aa)
     
  0.982
XP_500388.1
YALI0B01474p (277 aa)
       
  0.971
XP_506116.1
YALI0F31977p (1300 aa)
     
  0.857
XP_502661.1
YALI0D10571p; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.847
XP_504905.1
YALI0F02431p (409 aa)
       
  0.847
XP_503065.1
YALI0D20240p (1115 aa)
     
  0.842
XP_501848.1
YALI0C14960p (617 aa)
     
  0.841
XP_505458.1
YALI0F15477p (329 aa)
       
  0.826
SLX1
YALI0F21131p; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA (288 aa)
     
  0.799
UBC2
YALI0F26697p; Catalyzes the covalent attachment of ubiquitin to other proteins. Plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation and is also a prerequisite for H3K4me and H3K79me formation. Also involved in postreplication repair of UV-damaged DNA, in N-end rule-dependent protein degradation and in sporulation (151 aa)
       
  0.798
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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