STRINGSTRING
XP_501217.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501217.1" - YALI0B22330p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501217.1YALI0B22330p (481 aa)    
Predicted Functional Partners:
CEF1
YALI0D20086p; Involved in pre-mRNA splicing and cell cycle control (719 aa)
     
 
  0.967
XP_501048.1
YALI0B18238p (147 aa)
       
      0.908
XP_501420.1
YALI0C03982p (137 aa)
     
      0.907
XP_503358.1
YALI0D27346p (491 aa)
     
 
  0.907
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
       
 
  0.898
XP_502695.1
YALI0D11352p (431 aa)
     
 
  0.764
XP_505664.1
YALI0F20460p (633 aa)
     
      0.583
XP_503105.1
YALI0D21230p (478 aa)
     
      0.583
XP_500863.1
YALI0B13992p (565 aa)
     
      0.583
XP_501096.1
YALI0B19382p (1850 aa)
     
   
  0.416
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (6%) [HD]