STRINGSTRING
DBP6 protein (Yarrowia lipolytica) - STRING interaction network
"DBP6" - YALI0B22572p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBP6YALI0B22572p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (607 aa)    
Predicted Functional Partners:
XP_500372.1
YALI0B01078p (906 aa)
     
      0.943
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
     
   
  0.902
ROK1
YALI0B21538p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (547 aa)
   
   
0.858
DBP9
YALI0F31493p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (544 aa)
   
 
0.857
XP_501306.1
YALI0C00913p (912 aa)
     
        0.824
SPB1
YALI0D09251p; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (850 aa)
     
   
  0.821
DRS1
YALI0B16896p; ATP-binding RNA helicase involved in ribosome assembly (753 aa)
   
 
0.818
XP_505225.1
YALI0F09856p (522 aa)
     
   
  0.813
NOP58
YALI0B00946p; Required for pre-18S rRNA processing. May bind microtubules (By similarity) (515 aa)
     
 
  0.806
XP_505656.1
YALI0F20284p (530 aa)
     
   
  0.804
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (6%) [HD]