STRINGSTRING
XP_501296.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501296.1" - YALI0C00693p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501296.1YALI0C00693p (62 aa)    
Predicted Functional Partners:
XP_505678.1
YALI0F20768p (155 aa)
     
  0.996
XP_503903.1
YALI0E13486p (485 aa)
     
  0.974
XP_502208.1
YALI0C24057p (201 aa)
     
  0.973
XP_503266.1
YALI0D25234p (448 aa)
     
  0.966
SNU13
Small nucleolar ribonucleoprotein SNU13; Common component of the spliceosome and rRNA processing machinery. In association with the spliceosomal U4/U6.U5 tri-snRNP particle, required for splicing of pre-mRNA. In association with box C/D snoRNPs, required for processing of pre-ribosomal RNA (rRNA) and site-specific 2’-O-methylation of substrate RNAs. Essential for the accumulation and stability of U4 snRNA, U6 snRNA, and box C/D snoRNAs (By similarity) (126 aa)
     
  0.954
XP_505735.1
YALI0F22077p (583 aa)
       
 
  0.941
XP_500710.1
YALI0B10219p (723 aa)
     
 
  0.867
XP_505404.1
YALI0F14245p (275 aa)
     
      0.834
XP_505839.2
60S ribosomal protein L8 (261 aa)
     
  0.811
XP_505066.1
40S ribosomal protein S12 (142 aa)
     
  0.811
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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