STRINGSTRING
XP_501437.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501437.1" - YALI0C04345p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501437.1YALI0C04345p (262 aa)    
Predicted Functional Partners:
XP_505404.1
YALI0F14245p (275 aa)
     
 
  0.975
XP_505710.1
YALI0F21483p (293 aa)
     
 
  0.838
XP_503437.1
YALI0E01936p; Involved in nucleolar processing of pre-18S ribosomal RNA (244 aa)
     
   
  0.749
NOG2
YALI0F28083p; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation (509 aa)
     
      0.660
XP_500778.1
Ribosome biogenesis protein BRX1 (286 aa)
     
 
  0.645
XP_503601.1
YALI0E05797p (388 aa)
     
 
  0.628
XP_505544.1
YALI0F17622p (418 aa)
     
      0.601
XP_500368.1
YALI0B00990p; Involved in the biogenesis of the 60S ribosomal subunit (641 aa)
     
 
  0.594
IMP4
YALI0D23859p; Component of the U3 small nucleolar ribonucleoprotein. Required for the early cleavages at sites A0, A1 and A2 during 18S ribosomal pre-RNA processing (By similarity) (283 aa)
     
 
  0.591
DBP10
YALI0D24497p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (926 aa)
     
      0.587
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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