STRINGSTRING
XP_501468.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501468.1" - YALI0C05302p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501468.1YALI0C05302p (321 aa)    
Predicted Functional Partners:
XP_501696.1
YALI0C10846p (339 aa)
       
  0.970
SEC22
YALI0D21956p; Required for transport from the ER to the Golgi complex (213 aa)
       
  0.970
XP_502100.1
YALI0C21626p (266 aa)
       
  0.916
XP_501864.1
YALI0C15334p (709 aa)
       
 
  0.789
XP_500820.1
YALI0B12914p (652 aa)
       
 
  0.768
YKT6
YALI0E21329p (200 aa)
       
 
  0.464
XP_504948.1
YALI0F03454p; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (923 aa)
           
  0.406
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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