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PRP5 protein (Yarrowia lipolytica) - STRING interaction network
"PRP5" - YALI0C05368p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRP5YALI0C05368p; ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA (By similarity) (974 aa)    
Predicted Functional Partners:
XP_501149.1
YALI0B20724p (1158 aa)
     
  0.977
XP_501420.1
YALI0C03982p (137 aa)
     
  0.966
XP_503979.1
YALI0E15356p (225 aa)
     
  0.902
XP_500029.1
YALI0A13101p (867 aa)
     
  0.893
XP_504544.2
YALI0E29293p (170 aa)
     
  0.893
XP_502449.2
YALI0D05577p (585 aa)
     
  0.893
XP_503283.1
YALI0D25652p (207 aa)
     
  0.879
XP_501163.1
YALI0B21032p (468 aa)
     
  0.835
RSE1
YALI0D02717p; Involved in pre-mRNA splicing (1143 aa)
     
  0.827
XP_505210.1
YALI0F09493p (548 aa)
     
  0.784
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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