STRINGSTRING
XP_501501.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501501.1" - YALI0C06061p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501501.1YALI0C06061p (433 aa)    
Predicted Functional Partners:
XP_503310.1
YALI0D26315p (1527 aa)
     
  0.962
XP_504932.1
YALI0F03069p (638 aa)
   
  0.955
EAF3
YALI0D09845p; Involved in deacetylation of histones, chromatin assembly and chromosome segregation. May act as a transcriptional oscillator, directing histone deacetylases to specific chromosomal domains. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair (By similarity) (387 aa)
     
  0.948
HAT2
YALI0D26279p; Regulatory subunit of the histone acetylase B (HAT-B) complex. The complex acetylates ’Lys-12’ of histone H4 which is required for telomeric silencing (By similarity) (452 aa)
     
  0.944
XP_500852.1
YALI0B13750p (409 aa)
     
  0.944
XP_499647.1
YALI0A01331p (397 aa)
     
  0.944
XP_504372.1
YALI0E24893p (748 aa)
   
 
0.932
XP_505877.1
YALI0F25663p (285 aa)
     
  0.931
HTB1
YALI0E26455p; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (139 aa)
       
  0.926
XP_503882.2
YALI0E12991p (584 aa)
     
 
  0.915
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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