STRINGSTRING
XP_501542.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501542.1" - YALI0C07040p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501542.1YALI0C07040p (606 aa)    
Predicted Functional Partners:
XP_500756.1
YALI0B11352p (1111 aa)
     
  0.964
PRP45
YALI0C11715p; Involved in pre-mRNA splicing (568 aa)
     
  0.859
XP_501420.1
YALI0C03982p (137 aa)
     
  0.848
XP_503754.1
YALI0E09889p (601 aa)
       
  0.847
XP_503802.1
YALI0E10989p (345 aa)
     
  0.840
XP_503358.1
YALI0D27346p (491 aa)
     
  0.836
BBP
YALI0F18370p; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5’-UACUAAC-3’), the pyrimidine tract and the 3’-splice site at the 3’-end of introns (By similarity) (605 aa)
     
  0.835
XP_503188.1
YALI0D23375p (146 aa)
     
  0.834
XP_503112.1
YALI0D21450p (226 aa)
     
  0.834
LEA1
YALI0E30569p; Involved in pre-mRNA splicing (230 aa)
       
  0.822
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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