STRINGSTRING
XP_501608.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501608.1" - YALI0C08657p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501608.1YALI0C08657p (455 aa)    
Predicted Functional Partners:
XP_505772.1
YALI0F23045p (2017 aa)
     
  0.941
XP_500803.1
YALI0B12496p (464 aa)
     
  0.936
XP_503626.1
YALI0E06435p (626 aa)
       
  0.818
XP_501245.1
YALI0B22968p (247 aa)
     
  0.809
XP_504943.1
YALI0F03344p (278 aa)
       
  0.738
XP_504890.1
YALI0F02101p (495 aa)
     
  0.720
PAB1
YALI0C00539p; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation t [...] (629 aa)
       
  0.486
XP_500351.1
YALI0B00616p (589 aa)
       
  0.486
XP_505742.1
YALI0F22231p (295 aa)
       
      0.432
XP_500929.1
YALI0B15400p (630 aa)
     
 
  0.429
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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