STRINGSTRING
XP_501666.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501666.1" - YALI0C10032p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501666.1YALI0C10032p (656 aa)    
Predicted Functional Partners:
XP_503794.1
YALI0E10769p (893 aa)
     
0.974
XP_504806.1
YALI0F00154p; Component of the post-replicative DNA mismatch repair system (MMR) (887 aa)
 
  0.963
MSH3
YALI0A09724p; Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MSH2 to form MutS beta, which binds to DNA mismatches thereby initiating DNA repair. MSH3 provides substrate-binding and substrate specificity to the complex. When bound, the MutS beta heterodimer bends the DNA helix and shields approximately 20 base pairs. Acts mainly to repair insertion-deletion loops (IDLs) from 2 to 13 nucleotides in size, but can also repair base-base and single insertion-deletion mismatches that occur during replication. After mismatch binding, forms a ternary c [...] (990 aa)
 
  0.961
XP_505910.1
YALI0F26499p; Component of the post-replicative DNA mismatch repair system (MMR) (1149 aa)
 
  0.961
XP_503925.1
YALI0E14014p (546 aa)
   
  0.941
XP_500709.1
YALI0B10197p (974 aa)
 
  0.926
FEN1
YALI0F20042p; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome [...] (389 aa)
   
  0.867
XP_502661.1
YALI0D10571p; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
  0.854
XP_505458.1
YALI0F15477p (329 aa)
   
  0.844
XP_501549.1
YALI0C07260p (524 aa)
 
 
  0.807
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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