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XP_501718.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501718.1" - YALI0C11341p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501718.1YALI0C11341p (310 aa)    
Predicted Functional Partners:
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
       
      0.898
XP_502691.1
YALI0D11264p (223 aa)
     
 
  0.832
XP_500535.1
YALI0B05566p (1542 aa)
       
 
  0.626
XP_500868.1
YALI0B14102p (837 aa)
       
 
  0.604
XP_501584.1
YALI0C08118p (263 aa)
       
 
  0.600
XP_501417.1
40S ribosomal protein S25 (107 aa)
       
      0.582
XP_500243.1
YALI0A19470p (718 aa)
       
      0.577
XP_501745.1
YALI0C12034p (174 aa)
     
   
  0.545
XP_502167.1
YALI0C23144p; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1526 aa)
       
      0.540
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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