STRINGSTRING
XP_501788.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501788.1" - YALI0C13310p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501788.1YALI0C13310p (1010 aa)    
Predicted Functional Partners:
XP_502820.1
YALI0D14410p (536 aa)
     
  0.978
XP_505466.1
YALI0F15719p (212 aa)
     
  0.976
XP_502167.1
YALI0C23144p; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1526 aa)
     
  0.970
XP_501252.1
YALI0B23122p; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX (245 aa)
     
  0.963
XP_502805.2
YALI0D13838p (292 aa)
       
 
  0.941
DHH1
YALI0F21032p; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA- damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity) (522 aa)
     
  0.922
RAT1
YALI0D13750p; Possesses 5’->3’ exoribonuclease activity. Required for the processing of nuclear mRNA and rRNA precursors. May promote termination of transcription by RNA polymerase II (By similarity) (1010 aa)
     
  0.893
XP_500142.1
YALI0A16775p (144 aa)
       
  0.839
XP_504149.1
YALI0E19514p (849 aa)
       
  0.766
XP_002143124.1
YALI0F30426p (165 aa)
     
  0.745
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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