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ABD1 protein (Yarrowia lipolytica) - STRING interaction network
"ABD1" - YALI0C13618p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD1YALI0C13618p; Responsible for methylating the 5’-cap structure of mRNAs (609 aa)    
Predicted Functional Partners:
CEG1
YALI0E02904p; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5’-end of RNA via an enzyme-GMP covalent reaction intermediate (By similarity) (391 aa)
     
  0.755
XP_502400.1
YALI0D04334p (310 aa)
     
  0.744
XP_502376.1
YALI0D03718p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1229 aa)
     
    0.705
XP_501909.2
YALI0C16566p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1750 aa)
       
  0.690
SPT5
YALI0C11561p; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (By similarity) (980 aa)
     
  0.617
XP_499830.1
YALI0A06996p (364 aa)
       
  0.604
XP_505469.1
YALI0F15785p (366 aa)
     
 
    0.587
BUR1
YALI0D22935p; Serine/threonine-protein kinase involved in transcription regulation. Phosphorylates the UBC2/RAD6 ubiquitin- conjugating enzyme (E2), leading to monoubiquitination of histone H2B and the silencing of telomeric-associated genes. Also required for histone H3 methylation. Necessary for the recovery from pheromone-induced growth arrest in the cell cycle G1 phase (By similarity) (706 aa)
     
  0.584
XP_500029.1
YALI0A13101p (867 aa)
     
 
  0.582
XP_505540.1
YALI0F17534p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (100 aa)
     
 
  0.567
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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