STRINGSTRING
XP_501906.2 protein (Yarrowia lipolytica) - STRING interaction network
"XP_501906.2" - YALI0C16500p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_501906.2YALI0C16500p (340 aa)    
Predicted Functional Partners:
XP_499729.1
YALI0A03575p (105 aa)
       
  0.955
XP_501909.2
YALI0C16566p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1750 aa)
       
  0.660
XP_002143008.1
YALI0B07095p (413 aa)
     
    0.648
XP_503724.1
YALI0E09196p (295 aa)
       
  0.645
XP_501859.1
YALI0C15224p (393 aa)
       
      0.568
XP_501190.1
YALI0B21626p (1197 aa)
       
    0.549
TIM50
YALI0B20856p; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. Required to direct preproteins in transit and direct them to the channel protein TIM23, and possibly facilitates transfer of the translocating proteins from the TOM complex to the TIM23 complex (By similarity) (466 aa)
         
  0.533
XP_501225.1
YALI0B22528p (867 aa)
       
  0.453
XP_505345.1
YALI0F12815p (555 aa)
     
 
  0.452
XP_002143111.1
YALI0F13354p; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (110 aa)
         
  0.445
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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