STRINGSTRING
XP_502048.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502048.1" - YALI0C20339p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502048.1YALI0C20339p (312 aa)    
Predicted Functional Partners:
XP_504812.1
YALI0F00286p (1442 aa)
       
 
  0.979
XP_499751.1
YALI0A04345p (353 aa)
     
  0.968
XP_504253.1
YALI0E22022p (386 aa)
     
  0.957
XP_002143008.1
YALI0B07095p (413 aa)
     
  0.910
XP_500103.1
YALI0A15686p (981 aa)
       
  0.909
XP_500756.1
YALI0B11352p (1111 aa)
       
 
  0.858
XP_500039.1
YALI0A13519p (1247 aa)
       
  0.815
XP_499995.2
YALI0A11869p (1260 aa)
       
  0.815
XP_502733.1
YALI0D12210p (1041 aa)
       
  0.797
SPT5
YALI0C11561p; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (By similarity) (980 aa)
       
    0.761
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (6%) [HD]