STRINGSTRING
XP_502272.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502272.1" - YALI0D01133p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502272.1YALI0D01133p (944 aa)    
Predicted Functional Partners:
GSP1
YALI0F04730p; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (214 aa)
     
 
  0.940
XP_502448.2
YALI0D05547p (339 aa)
       
 
  0.940
XP_504876.1
YALI0F01793p (904 aa)
     
 
  0.908
NOP12
YALI0F05918p; Involved in pre-25S rRNA processing (509 aa)
     
 
  0.616
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
       
 
  0.605
XP_505840.1
YALI0F24717p (330 aa)
       
 
  0.605
XP_504609.1
YALI0E30877p (452 aa)
       
 
  0.605
XP_504402.1
YALI0E25872p (303 aa)
       
 
  0.605
XP_503802.1
YALI0E10989p (345 aa)
       
 
  0.605
XP_502423.2
YALI0D04917p (430 aa)
       
 
  0.605
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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