STRINGSTRING
XP_502295.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502295.1" - YALI0D01628p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502295.1YALI0D01628p (649 aa)    
Predicted Functional Partners:
XP_503752.1
YALI0E09845p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1165 aa)
   
        0.797
XP_502658.1
YALI0D10505p (685 aa)
     
      0.772
XP_499726.1
YALI0A03509p (701 aa)
     
        0.749
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
     
        0.746
XP_505485.1
YALI0F16137p (372 aa)
     
      0.734
XP_500726.1
YALI0B10560p (609 aa)
     
 
  0.727
XP_505532.1
YALI0F17358p (653 aa)
     
      0.723
DRS1
YALI0B16896p; ATP-binding RNA helicase involved in ribosome assembly (753 aa)
     
 
  0.720
XP_500778.1
Ribosome biogenesis protein BRX1 (286 aa)
     
        0.718
XP_500898.1
YALI0B14751p (1023 aa)
   
   
  0.717
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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