STRINGSTRING
XP_502302.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502302.1" - YALI0D01892p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502302.1YALI0D01892p (514 aa)    
Predicted Functional Partners:
XP_002143008.1
YALI0B07095p (413 aa)
     
  0.982
XP_500103.1
YALI0A15686p (981 aa)
     
  0.977
XP_499751.1
YALI0A04345p (353 aa)
     
  0.974
SPT5
YALI0C11561p; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (By similarity) (980 aa)
     
  0.974
XP_504253.1
YALI0E22022p (386 aa)
     
  0.971
SPT16
YALI0D14652p; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleoso [...] (1003 aa)
     
  0.971
POB3
YALI0D25058p; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleoso [...] (544 aa)
     
  0.970
XP_502914.1
YALI0D16863p (339 aa)
       
      0.878
XP_501069.1
YALI0B18700p (342 aa)
       
      0.878
XP_501909.2
YALI0C16566p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1750 aa)
       
  0.859
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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