STRINGSTRING
XP_502311.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502311.1" - YALI0D02079p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502311.1YALI0D02079p (218 aa)    
Predicted Functional Partners:
XP_503283.1
YALI0D25652p (207 aa)
       
    0.761
XP_504024.2
YALI0E16500p (184 aa)
     
  0.726
XP_502209.2
YALI0C24079p (1220 aa)
     
 
  0.721
XP_500756.1
YALI0B11352p (1111 aa)
     
  0.719
XP_502448.2
YALI0D05547p (339 aa)
     
  0.717
CFT1
YALI0E03982p; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation-dependent pre-mRNA 3’-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3’-end formation (By similarity) (1269 aa)
     
 
  0.714
XP_503327.1
YALI0D26664p (194 aa)
       
  0.690
XP_503802.1
YALI0E10989p (345 aa)
     
  0.643
XP_505974.1
YALI0F28039p (518 aa)
     
 
  0.625
PRP45
YALI0C11715p; Involved in pre-mRNA splicing (568 aa)
     
    0.616
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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