STRINGSTRING
XP_502396.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502396.1" - YALI0D04246p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502396.1YALI0D04246p (736 aa)    
Predicted Functional Partners:
XP_499814.1
YALI0A06655p (930 aa)
     
0.916
PEX3
YALI0F22539p; Involved in peroxisome biosynthesis. Seems to directly or indirectly sequesters components of the peroxisome biogenesis machinery (431 aa)
     
  0.832
XP_501231.1
YALI0B22660p (324 aa)
     
  0.788
XP_501103.1
YALI0B19624p (395 aa)
     
  0.778
XP_500866.1
YALI0B14058p (85 aa)
       
 
  0.768
XP_502167.1
YALI0C23144p; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1526 aa)
     
      0.763
XP_504149.1
YALI0E19514p (849 aa)
       
      0.734
XP_503980.1
YALI0E15378p (901 aa)
   
 
  0.726
XP_505458.1
YALI0F15477p (329 aa)
       
      0.720
XP_502959.1
YALI0D17864p (691 aa)
     
 
  0.647
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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