STRINGSTRING
XP_502503.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502503.1" - YALI0D06820p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502503.1YALI0D06820p (913 aa)    
Predicted Functional Partners:
XP_505993.1
YALI0F28501p (531 aa)
     
 
  0.942
XP_502730.1
YALI0D12144p (865 aa)
     
 
  0.929
XP_504016.1
YALI0E16324p (1040 aa)
     
 
  0.825
XP_503855.1
YALI0E12243p (1045 aa)
     
 
  0.824
XP_503737.1
YALI0E09493p (2186 aa)
     
      0.810
XP_504876.1
YALI0F01793p (904 aa)
     
 
  0.797
GSP1
YALI0F04730p; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (214 aa)
     
 
  0.772
XP_503752.1
YALI0E09845p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1165 aa)
     
        0.761
XP_501059.1
YALI0B18480p (907 aa)
     
 
  0.732
PRT1
YALI0F16115p; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (717 aa)
     
        0.722
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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