STRINGSTRING
XP_502538.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502538.1" - YALI0D07590p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502538.1YALI0D07590p (471 aa)    
Predicted Functional Partners:
XP_501555.1
YALI0C07436p (582 aa)
     
 
  0.830
XP_500889.1
YALI0B14553p (701 aa)
     
 
  0.762
XP_503300.1
YALI0D26103p (760 aa)
       
 
  0.747
XP_504534.1
YALI0E29051p (333 aa)
     
 
  0.632
KU70
YALI0C08701p; Single-stranded DNA-dependent ATP-dependent helicase. Involved in non-homologous end joining (NHEJ) DNA double strand break repair. DNA-binding is sequence-independent but has a high affinity to nicks in double-stranded DNA and to the ends of duplex DNA. Binds to naturally occurring chromosomal ends, and therefore provides chromosomal end protection. Required also for telomere recombination to repair telomeric ends in the absence of telomerase. KU70, of the KU70/KU80 heterodimer, binds to the stem loop of TLC1, the RNA component of telomerase. Involved in telomere mainten [...] (585 aa)
     
 
  0.589
XP_501848.1
YALI0C14960p (617 aa)
     
 
  0.584
KU80
YALI0E02068p; Single-stranded DNA-dependent ATP-dependent helicase. Involved in non-homologous end joining (NHEJ) DNA double strand break repair. DNA-binding is sequence-independent but has a high affinity to nicks in double-stranded DNA and to the ends of duplex DNA. Binds to naturally occurring chromosomal ends, and therefore provides chromosomal end protection. Required also for telomere recombination to repair telomeric ends in the absence of telomerase. KU70, of the KU70/KU80 heterodimer, binds to the stem loop of TLC1, the RNA component of telomerase. Involved in telomere mainten [...] (726 aa)
       
  0.539
XP_502740.1
YALI0D12364p (710 aa)
       
 
  0.520
XP_503288.1
YALI0D25762p (370 aa)
     
 
  0.500
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
     
 
  0.460
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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