STRINGSTRING
XP_502561.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502561.1" - YALI0D08162p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502561.1YALI0D08162p (202 aa)    
Predicted Functional Partners:
XP_501614.1
YALI0C08782p (190 aa)
     
  0.970
XP_504740.1
YALI0E33649p (450 aa)
     
 
  0.945
RYL1
YALI0E23067p; Protein transport. Probably involved in vesicular traffic (By similarity) (203 aa)
   
 
0.931
XP_505064.1
YALI0F06116p (566 aa)
     
 
  0.919
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
       
 
  0.902
XP_500715.2
YALI0B10318p (189 aa)
       
  0.895
XP_501219.1
YALI0B22396p (135 aa)
       
  0.862
XP_500541.1
YALI0B05720p (281 aa)
       
  0.860
XP_504903.1
YALI0F02387p (1906 aa)
     
  0.851
XP_501920.1
YALI0C16819p (306 aa)
     
  0.849
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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