STRINGSTRING
XP_502565.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502565.1" - YALI0D08250p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502565.1YALI0D08250p (492 aa)    
Predicted Functional Partners:
XP_504196.1
YALI0E20647p (407 aa)
   
  0.971
XP_500000.1
YALI0A12045p; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (165 aa)
   
 
  0.883
XP_505321.1
YALI0F12199p (605 aa)
   
  0.872
XP_502488.1
YALI0D06501p (250 aa)
   
  0.822
XP_503737.1
YALI0E09493p (2186 aa)
         
  0.681
XP_500663.1
YALI0B08965p; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (204 aa)
   
 
  0.666
XP_504195.1
YALI0E20625p (229 aa)
   
   
  0.651
XP_500110.1
YALI0A15950p (855 aa)
         
  0.645
XP_501315.1
YALI0C01111p (228 aa)
   
 
  0.618
XP_504615.1
YALI0E31009p (450 aa)
   
   
  0.514
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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