STRINGSTRING
XP_502638.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502638.1" - YALI0D09955p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502638.1YALI0D09955p (1035 aa)    
Predicted Functional Partners:
XP_503358.1
YALI0D27346p (491 aa)
     
  0.986
XP_501420.1
YALI0C03982p (137 aa)
     
  0.985
XP_500302.1
YALI0A20768p (950 aa)
     
  0.984
CEF1
YALI0D20086p; Involved in pre-mRNA splicing and cell cycle control (719 aa)
     
  0.979
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
     
  0.978
XP_501687.2
YALI0C10648p (2357 aa)
     
  0.974
RSE1
YALI0D02717p; Involved in pre-mRNA splicing (1143 aa)
     
  0.969
XP_505676.1
YALI0F20724p (2106 aa)
     
  0.966
XP_501149.1
YALI0B20724p (1158 aa)
     
  0.966
SYF1
YALI0D00561p; Involved in pre-mRNA splicing and cell cycle progression (736 aa)
     
  0.962
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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