STRINGSTRING
XP_502640.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502640.1" - YALI0D09999p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502640.1YALI0D09999p (444 aa)    
Predicted Functional Partners:
SNF7
YALI0C16027p; Required for the sorting and concentration of proteins resulting in the entry of these proteins into the invaginating vesicles of the multivesicular body (MVB). Also required for the proteolytic cleavage of the transcription factor RIM101 in response to alkaline ambient pH (By similarity) (215 aa)
     
  0.901
XP_500989.1
YALI0B16786p (169 aa)
         
  0.610
XP_500664.1
YALI0B08987p (209 aa)
     
 
  0.589
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
       
      0.514
XP_501040.1
YALI0B18040p (230 aa)
     
  0.501
XP_503370.1
YALI0E00396p (213 aa)
     
  0.478
XP_500926.1
YALI0B15334p (253 aa)
     
 
  0.449
XP_501669.2
YALI0C10098p (194 aa)
     
  0.443
XP_500970.1
YALI0B16368p (428 aa)
     
 
  0.438
XP_505703.1
YALI0F21307p (211 aa)
     
 
  0.428
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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