STRINGSTRING
XP_502805.2 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502805.2" - YALI0D13838p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502805.2YALI0D13838p (292 aa)    
Predicted Functional Partners:
XP_501788.1
YALI0C13310p (1010 aa)
       
 
  0.941
DHH1
YALI0F21032p; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA- damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity) (522 aa)
     
 
  0.755
XP_505466.1
YALI0F15719p (212 aa)
       
 
  0.626
XP_502820.1
YALI0D14410p (536 aa)
     
 
  0.620
XP_503225.1
YALI0D24299p (255 aa)
     
 
  0.609
XP_504098.1
YALI0E18282p (326 aa)
     
 
  0.603
XP_503381.1
YALI0E00660p (512 aa)
       
 
  0.602
XP_505895.1
YALI0F26125p (210 aa)
       
 
  0.597
XP_505891.1
YALI0F26037p (343 aa)
       
 
  0.597
XP_503861.1
YALI0E12397p (306 aa)
       
 
  0.597
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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