STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_D14520gYALI0D14520p. (415 aa)    
Predicted Functional Partners:
YALI0_C04928g
YALI0C04928p.
   
 
 0.996
YALI0_E12375g
YALI0E12375p.
   
 0.989
YALI0_C08459g
YALI0C08459p.
    
 0.989
YALI0_C07953g
YALI0C07953p.
    
 0.989
HOG1
Mitogen-activated protein kinase HOG1; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. HOG1 sub-subfamily.
    
 0.985
TEF
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
   
 0.983
YALI0_C05665g
YALI0C05665p; Belongs to the 14-3-3 family.
   
 0.981
YALI0_B14377g
YALI0B14377p; Belongs to the 14-3-3 family.
    
 0.981
YALI0_F07084g
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.980
YALI0_A02090g
YALI0A02090p.
   
 0.979
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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