STRINGSTRING
XP_502998.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_502998.1" - YALI0D18700p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_502998.1YALI0D18700p (412 aa)    
Predicted Functional Partners:
GRC3
YALI0E16258p; Polynucleotide 5’-kinase involved in rRNA processing (599 aa)
     
  0.974
XP_499937.1
YALI0A10252p (407 aa)
     
  0.838
IPI3
YALI0D13948p; Involved inthe processing of ITS2 sequences from 35S pre-rRNA (426 aa)
     
  0.804
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
     
 
  0.729
NOP7
YALI0B23342p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (590 aa)
     
 
  0.672
ERB1
YALI0E26389p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (820 aa)
     
  0.639
XP_502097.1
60S ribosomal protein L3 (387 aa)
       
  0.592
XP_506048.1
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (359 aa)
     
 
    0.545
XP_505710.1
YALI0F21483p (293 aa)
     
 
    0.537
XP_504582.1
YALI0E30217p (1567 aa)
     
  0.517
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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