STRINGSTRING
XP_503085.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503085.1" - YALI0D20724p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503085.1YALI0D20724p (303 aa)    
Predicted Functional Partners:
XP_504372.1
YALI0E24893p (748 aa)
   
  0.739
XP_500305.1
YALI0A20834p (715 aa)
   
  0.739
XP_502907.1
YALI0D16687p (411 aa)
   
     
  0.710
XP_501630.1
YALI0C09185p (764 aa)
       
  0.680
XP_501331.1
YALI0C01463p (872 aa)
       
  0.680
XP_500921.1
YALI0B15246p (1013 aa)
       
  0.680
HTB1
YALI0E26455p; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (139 aa)
       
  0.672
SET1
YALI0B14883p; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation (1170 aa)
     
  0.669
XP_505887.1
YALI0F25883p (103 aa)
       
  0.669
XP_504816.1
YALI0F00374p; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (84 aa)
       
  0.669
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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