STRINGSTRING
XP_503172.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503172.1" - YALI0D22979p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503172.1YALI0D22979p (883 aa)    
Predicted Functional Partners:
XP_501108.1
YALI0B19734p (901 aa)
     
 
  0.938
XP_505106.1
YALI0F07084p (2316 aa)
     
 
  0.786
TEL1
YALI0D03888p; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]-Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability (By similarity) (2282 aa)
       
 
  0.719
XP_501349.1
YALI0C02057p (3809 aa)
     
 
  0.682
XP_505672.1
YALI0F20636p (1845 aa)
     
 
  0.635
RVB1
YALI0C21868p; DNA helicase which participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. The SWR1 complex mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. The INO80 complex remodels chromatin by shifting nucleosomes and is involved in DNA repair. Also involved in pre-rRNA processing (By similarity) (453 aa)
       
 
  0.604
RVB2
YALI0E31449p; DNA helicase which participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. The SWR1 complex mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. The INO80 complex remodels chromatin by shifting nucleosomes and is involved in DNA repair. Also involved in pre-rRNA processing (By similarity) (466 aa)
       
 
  0.602
XP_501305.1
YALI0C00891p (662 aa)
       
 
  0.401
XP_500363.1
YALI0B00880p (580 aa)
       
 
  0.401
XP_499936.1
YALI0A10230p (654 aa)
       
 
  0.401
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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