STRINGSTRING
XP_503184.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503184.1" - YALI0D23287p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503184.1YALI0D23287p (1660 aa)    
Predicted Functional Partners:
XP_504988.1
YALI0F04334p (572 aa)
     
  0.841
XP_505476.1
YALI0F15939p (857 aa)
     
  0.807
XP_505903.1
YALI0F26345p (427 aa)
       
  0.795
XP_503270.1
YALI0D25344p (385 aa)
       
  0.789
CSE4
YALI0B13508p; Histone H3-like variant which exclusively replaces conventional H3 in the nucleosome core of centromeric chromatin at the inner plate of the kinetochore. Required for recruitment and assembly of kinetochore proteins, mitotic progression and chromosome segregation. May serve as an epigenetic mark that propagates centromere identity through replication and cell division (By similarity) (150 aa)
       
  0.766
XP_506030.1
YALI0F29997p (604 aa)
       
 
  0.762
XP_500367.1
YALI0B00968p (497 aa)
     
  0.758
SFH1
YALI0D09779p; Part of the chromatin structure-remodeling complex (RSC) which is involved in transcription regulation and nucleosome positioning. RSC is responsible for the transfer of a histone octamer from a nucleosome core particle to naked DNA. The reaction requires ATP and involves an activated RSC-nucleosome intermediate. Remodeling reaction also involves DNA translocation, DNA twist and conformational change. As a reconfigurer of centromeric and flanking nucleosomes, RSC complex is required both for proper kinetochore function in chromosome segregation and, via a PKC1-dependent s [...] (441 aa)
     
  0.754
XP_501810.1
YALI0C13904p (1264 aa)
     
  0.753
XP_505413.1
YALI0F14443p (463 aa)
     
  0.752
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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