STRINGSTRING
XP_503300.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503300.1" - YALI0D26103p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503300.1YALI0D26103p (760 aa)    
Predicted Functional Partners:
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
     
 
  0.982
XP_499726.1
YALI0A03509p (701 aa)
     
      0.915
XP_500005.1
YALI0A12155p (406 aa)
     
      0.904
XP_501230.1
YALI0B22638p (159 aa)
       
  0.765
XP_506116.1
YALI0F31977p (1300 aa)
     
 
  0.762
XP_502538.1
YALI0D07590p (471 aa)
       
 
  0.747
XP_002143107.1
YALI0F06826p (90 aa)
       
  0.634
SPT16
YALI0D14652p; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleoso [...] (1003 aa)
     
 
  0.603
POL2
YALI0E26367p; DNA polymerase II participates in chromosomal DNA replication (2183 aa)
     
 
  0.568
XP_500889.1
YALI0B14553p (701 aa)
     
 
  0.540
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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