STRINGSTRING
XP_503336.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503336.1" - YALI0D26862p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503336.1YALI0D26862p (496 aa)    
Predicted Functional Partners:
TFB2
YALI0F30173p; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (467 aa)
     
  0.991
TFB4
YALI0C04367p; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA. Has a role in the initiation of transcription (By similarity) (340 aa)
     
  0.978
XP_505677.1
YALI0F20746p (785 aa)
     
  0.977
XP_500801.1
YALI0B12452p (538 aa)
     
  0.973
XP_500771.1
YALI0B11726p (827 aa)
     
  0.959
TFB3
YALI0E01826p; Acts as component of the general transcription and DNA repair factor IIH (TFIIH or factor B), which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA. TFIIH as CTD kinase activity and DNA-dependent ATPase activity, and is essential for polymerase II transcription (By similarity) (346 aa)
     
  0.959
XP_505904.1
YALI0F26367p (382 aa)
     
  0.955
TFB5
YALI0F17688p; Component of the general transcription and DNA repair factor IIH (TFIIH), which is essential for both basal and activated transcription, as well as for nucleotide excision repair (NER) of DNA. TFB5 is required for stable recruitment of TFIIH to a promoter, but not for stability of TFIIH subunits (By similarity) (75 aa)
       
  0.943
XP_505409.1
YALI0F14355p; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (265 aa)
     
  0.940
XP_502400.1
YALI0D04334p (310 aa)
     
  0.887
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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