STRINGSTRING
XP_503401.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503401.1" - YALI0E01100p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503401.1YALI0E01100p (509 aa)    
Predicted Functional Partners:
XP_503601.1
YALI0E05797p (388 aa)
     
 
  0.985
NOP7
YALI0B23342p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (590 aa)
     
 
  0.975
XP_499768.1
YALI0A04939p (998 aa)
     
 
  0.970
XP_505532.1
YALI0F17358p (653 aa)
     
      0.970
GUA1
YALI0B16104p (527 aa)
     
        0.967
XP_502927.1
YALI0D17116p (510 aa)
     
      0.955
XP_500778.1
Ribosome biogenesis protein BRX1 (286 aa)
     
 
  0.951
DBP3
YALI0D09449p; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (532 aa)
     
 
  0.950
DRS1
YALI0B16896p; ATP-binding RNA helicase involved in ribosome assembly (753 aa)
     
      0.949
ERB1
YALI0E26389p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (820 aa)
     
   
  0.944
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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